species:   Artha
pid:       MI0020193
parent:    ath-MIR5998b
paralog:   
locus:     5:3247228-3247424
matures:   ['ACAGUUUGUGUUUUGUUUUGU', 'AAAACAAAACACAAACUGUUC']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 5:3247228-3247424

0 out of bounds
2 alignments
1 proper strand
1 stranded perfect matches

                    ***********************                                                                                                       ***********************                            
CUCAUUUUGUGAGAAAACAAAUUGGAACAGUUUGUGUUUUGUUUUGUGAUGUUGGAACAAAUUGGAAGAAUUGCCUCCAAGAAGUCAGAGUUUGAGAAUUGUACAUGGCGGCGACGGUGGAGAGUAACGAAUCCAACAAAACACAAAACAAAACACAAACUGUUCCAAUUUGUUUUCUCCUUAAGUUCACAAUCGUA
...((((...((((((((((((((((((((((((((((((((((((((.(((((((.....((.(.....(((((((((....(((...(((..............)))...)))..))))).))))).)))))))))...))))))))))))))))))))))))))))))))))))))...))))...........
--------------------------ACAGUUUGUGUUUUGUUUUGU------------------------------------------------------------------------------------------------------------------------------------------------------ l=21 a=0 c
------------------------------------------------------------------------------------------------------------------------------------------------AAAACAAAACACAAACUGUUC-------------------------------- l=21 a=0 c*
----------------------------------------------------------------------------------------------------------------------------------------------------CAAAACACAAACUGUUCCAAU---------------------------- l=21 a=1 ma
----------------------UGGAACAGUUUGUGUUUUGUU---------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=0 ma*

----------------------------------------------------------------------------------------------------------------------------------------------------CAAAACACAAACUGUUCCAAU---------------------------- l=21 a=1 (ma)

mb-01011
ax-1011011
ku-00
ss-110110011100
fn-001
